Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.89■□□□□ 0.29
IRX4P78413 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IRX4P78413 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IRX4P78413 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.88■□□□□ 0.29
IRX4P78413 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.88■□□□□ 0.29
IRX4P78413 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IRX4P78413 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 RBPMS2P1-201ENST00000437762 623 ntBASIC16.88■□□□□ 0.29
IRX4P78413 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
IRX4P78413 GAPDHP21-201ENST00000450301 1010 ntBASIC16.88■□□□□ 0.29
IRX4P78413 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.88■□□□□ 0.29
IRX4P78413 LINC02560-201ENST00000596379 459 ntBASIC16.88■□□□□ 0.29
IRX4P78413 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.88■□□□□ 0.29
IRX4P78413 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.88■□□□□ 0.29
IRX4P78413 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
IRX4P78413 FO538757.1-201ENST00000623083 1397 ntBASIC16.88■□□□□ 0.29
IRX4P78413 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IRX4P78413 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.87■□□□□ 0.29
IRX4P78413 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX4P78413 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
IRX4P78413 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX4P78413 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX4P78413 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.87■□□□□ 0.29
IRX4P78413 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
IRX4P78413 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
IRX4P78413 GPS2P2-201ENST00000430745 888 ntBASIC16.87■□□□□ 0.29
IRX4P78413 AC087163.2-201ENST00000457299 853 ntBASIC16.87■□□□□ 0.29
IRX4P78413 RN7SL589P-201ENST00000481268 310 ntBASIC16.87■□□□□ 0.29
IRX4P78413 AC125807.1-201ENST00000483097 614 ntBASIC16.87■□□□□ 0.29
IRX4P78413 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 SLC25A39P2-201ENST00000537614 270 ntBASIC16.87■□□□□ 0.29
IRX4P78413 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.87■□□□□ 0.29
IRX4P78413 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.87■□□□□ 0.29
IRX4P78413 AC008761.3-201ENST00000624803 892 ntBASIC16.87■□□□□ 0.29
IRX4P78413 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 TUBB8P12-201ENST00000308911 1335 ntBASIC16.87■□□□□ 0.29
IRX4P78413 TUBB7P-202ENST00000428444 1305 ntBASIC16.87■□□□□ 0.29
IRX4P78413 TUBB8P7-204ENST00000567960 1332 ntBASIC16.87■□□□□ 0.29
IRX4P78413 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
IRX4P78413 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
IRX4P78413 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.86■□□□□ 0.29
IRX4P78413 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.86■□□□□ 0.29
IRX4P78413 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IRX4P78413 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms