Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.18■□□□□ 0.34
CDH8P55286 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH8P55286 AL390754.1-201ENST00000619088 582 ntBASIC17.18■□□□□ 0.34
CDH8P55286 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH8P55286 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH8P55286 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH8P55286 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CDH8P55286 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH8P55286 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH8P55286 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH8P55286 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH8P55286 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH8P55286 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 MIR770-201ENST00000390219 98 ntBASIC17.17■□□□□ 0.34
CDH8P55286 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 AC004987.2-201ENST00000395959 1148 ntBASIC17.17■□□□□ 0.34
CDH8P55286 AL080243.2-201ENST00000418783 582 ntBASIC17.17■□□□□ 0.34
CDH8P55286 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH8P55286 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH8P55286 HLA-V-204ENST00000476601 1289 ntBASIC17.17■□□□□ 0.34
CDH8P55286 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.17■□□□□ 0.34
CDH8P55286 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH8P55286 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 AC243562.2-201ENST00000561247 970 ntBASIC17.17■□□□□ 0.34
CDH8P55286 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH8P55286 TEX28P1-201ENST00000613479 1221 ntBASIC17.17■□□□□ 0.34
CDH8P55286 TEX28P2-201ENST00000617764 1221 ntBASIC17.17■□□□□ 0.34
CDH8P55286 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.17■□□□□ 0.34
CDH8P55286 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH8P55286 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDH8P55286 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH8P55286 AC112504.1-201ENST00000623415 1841 ntBASIC17.17■□□□□ 0.34
CDH8P55286 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 AC018892.3-201ENST00000623986 2499 ntBASIC17.16■□□□□ 0.34
CDH8P55286 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH8P55286 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH8P55286 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH8P55286 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH8P55286 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH8P55286 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH8P55286 SPDYE17-201ENST00000412399 783 ntBASIC17.16■□□□□ 0.34
CDH8P55286 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH8P55286 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDH8P55286 AC093214.1-201ENST00000511688 1107 ntBASIC17.16■□□□□ 0.34
CDH8P55286 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH8P55286 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH8P55286 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH8P55286 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH8P55286 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH8P55286 AL590560.3-201ENST00000623350 461 ntBASIC17.16■□□□□ 0.34
CDH8P55286 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH8P55286 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDH8P55286 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH8P55286 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH8P55286 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms