Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 AC026748.1-201ENST00000624349 3251 ntBASIC15.72■□□□□ 0.11
IDH3AP50213 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
IDH3AP50213 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IDH3AP50213 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IDH3AP50213 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.71■□□□□ 0.11
IDH3AP50213 HMGA1P7-201ENST00000406908 502 ntBASIC15.71■□□□□ 0.11
IDH3AP50213 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.71■□□□□ 0.11
IDH3AP50213 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.71■□□□□ 0.11
IDH3AP50213 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
IDH3AP50213 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.71■□□□□ 0.11
IDH3AP50213 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 AL031055.1-201ENST00000606362 631 ntBASIC15.71■□□□□ 0.11
IDH3AP50213 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.71■□□□□ 0.11
IDH3AP50213 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.71■□□□□ 0.11
IDH3AP50213 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
IDH3AP50213 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IDH3AP50213 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.71■□□□□ 0.1
IDH3AP50213 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
IDH3AP50213 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.71■□□□□ 0.1
IDH3AP50213 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
IDH3AP50213 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.71■□□□□ 0.1
IDH3AP50213 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.1
IDH3AP50213 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.71■□□□□ 0.1
IDH3AP50213 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IDH3AP50213 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 AC009090.5-201ENST00000624886 2285 ntBASIC15.7■□□□□ 0.1
IDH3AP50213 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IDH3AP50213 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
IDH3AP50213 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 IGHV3-65-201ENST00000523210 341 ntBASIC15.7■□□□□ 0.1
IDH3AP50213 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.7■□□□□ 0.1
IDH3AP50213 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
IDH3AP50213 ACTL9-202ENST00000612068 1252 ntBASIC15.7■□□□□ 0.1
IDH3AP50213 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.7■□□□□ 0.1
IDH3AP50213 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IDH3AP50213 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.7■□□□□ 0.1
IDH3AP50213 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IDH3AP50213 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms