Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 KRT18P27-201ENST00000427733 1299 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 IGHV3-65-201ENST00000523210 341 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 RN7SL510P-201ENST00000581311 263 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 RPS15-212ENST00000593052 629 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 REXO1L3P-201ENST00000622202 1288 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 TP73-AS1-207ENST00000624167 988 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 AL671710.1-201ENST00000610245 2349 ntBASIC10.31□□□□□ -0.76
UBE2AP49459 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.31□□□□□ -0.76
UBE2AP49459 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
UBE2AP49459 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
UBE2AP49459 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.31□□□□□ -0.76
UBE2AP49459 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 AP002414.3-201ENST00000589352 1468 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 PCGF3-213ENST00000620529 1899 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 LINC00554-201ENST00000564841 3011 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 PMS2P1-201ENST00000431037 1228 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 AC108073.2-201ENST00000464002 357 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2AP49459 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2AP49459 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.3□□□□□ -0.76
UBE2AP49459 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 AC020765.3-201ENST00000613051 740 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 AC010654.1-201ENST00000615722 808 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 AC004790.2-201ENST00000623588 572 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.3□□□□□ -0.76
UBE2AP49459 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
UBE2AP49459 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.3□□□□□ -0.76
UBE2AP49459 GGT3P-204ENST00000453783 1664 ntBASIC10.3□□□□□ -0.76
UBE2AP49459 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms