Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SRP9P49458 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.39□□□□□ -0.11
SRP9P49458 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.39□□□□□ -0.11
SRP9P49458 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SLC25A6P2-201ENST00000497974 877 ntBASIC14.39□□□□□ -0.11
SRP9P49458 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.39□□□□□ -0.11
SRP9P49458 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.39□□□□□ -0.11
SRP9P49458 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.39□□□□□ -0.11
SRP9P49458 AC027601.4-201ENST00000611259 610 ntBASIC14.39□□□□□ -0.11
SRP9P49458 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.39□□□□□ -0.11
SRP9P49458 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.39□□□□□ -0.11
SRP9P49458 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRP9P49458 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
SRP9P49458 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 AC068587.6-202ENST00000641839 5619 ntBASIC14.38□□□□□ -0.11
SRP9P49458 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SRP9P49458 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SRP9P49458 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.38□□□□□ -0.11
SRP9P49458 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.38□□□□□ -0.11
SRP9P49458 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.38□□□□□ -0.11
SRP9P49458 RNA5SP416-201ENST00000516838 111 ntBASIC14.38□□□□□ -0.11
SRP9P49458 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 SLC25A1P1-201ENST00000528351 927 ntBASIC14.38□□□□□ -0.11
SRP9P49458 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.38□□□□□ -0.11
SRP9P49458 AC005412.3-201ENST00000580309 715 ntBASIC14.38□□□□□ -0.11
SRP9P49458 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
SRP9P49458 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.38□□□□□ -0.11
SRP9P49458 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 AC112504.1-201ENST00000623415 1841 ntBASIC14.38□□□□□ -0.11
SRP9P49458 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRP9P49458 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.38□□□□□ -0.11
SRP9P49458 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.38□□□□□ -0.11
SRP9P49458 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms