Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.71■□□□□ 0.27
SCNN1AP37088 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCNN1AP37088 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCNN1AP37088 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
SCNN1AP37088 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCNN1AP37088 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCNN1AP37088 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SCNN1AP37088 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCNN1AP37088 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
SCNN1AP37088 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCNN1AP37088 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SCNN1AP37088 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SCNN1AP37088 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.7■□□□□ 0.26
SCNN1AP37088 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCNN1AP37088 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCNN1AP37088 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.7■□□□□ 0.26
SCNN1AP37088 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 RPL37AP1-201ENST00000412502 279 ntBASIC16.7■□□□□ 0.26
SCNN1AP37088 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SCNN1AP37088 MIR4313-201ENST00000580760 101 ntBASIC16.7■□□□□ 0.26
SCNN1AP37088 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.7■□□□□ 0.26
SCNN1AP37088 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.7■□□□□ 0.26
SCNN1AP37088 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.7■□□□□ 0.26
SCNN1AP37088 MIR6069-201ENST00000620069 79 ntBASIC16.7■□□□□ 0.26
SCNN1AP37088 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SCNN1AP37088 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.7■□□□□ 0.26
SCNN1AP37088 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.7■□□□□ 0.26
SCNN1AP37088 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SCNN1AP37088 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SCNN1AP37088 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCNN1AP37088 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.69■□□□□ 0.26
SCNN1AP37088 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.69■□□□□ 0.26
SCNN1AP37088 AC092183.1-201ENST00000469884 875 ntBASIC16.69■□□□□ 0.26
SCNN1AP37088 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.69■□□□□ 0.26
SCNN1AP37088 TEX28P1-201ENST00000613479 1221 ntBASIC16.69■□□□□ 0.26
SCNN1AP37088 AL138828.2-201ENST00000615812 383 ntBASIC16.69■□□□□ 0.26
SCNN1AP37088 TEX28P2-201ENST00000617764 1221 ntBASIC16.69■□□□□ 0.26
SCNN1AP37088 AL033527.5-202ENST00000641632 1098 ntBASIC16.69■□□□□ 0.26
SCNN1AP37088 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.69■□□□□ 0.26
SCNN1AP37088 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCNN1AP37088 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.69■□□□□ 0.26
SCNN1AP37088 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
SCNN1AP37088 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.68■□□□□ 0.26
SCNN1AP37088 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SCNN1AP37088 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCNN1AP37088 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCNN1AP37088 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCNN1AP37088 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCNN1AP37088 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms