Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NF1P21359 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.86□□□□□ -0.35
NF1P21359 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.86□□□□□ -0.35
NF1P21359 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NF1P21359 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NF1P21359 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 FAM197Y7-201ENST00000432892 766 ntBASIC12.85□□□□□ -0.35
NF1P21359 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.85□□□□□ -0.35
NF1P21359 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.85□□□□□ -0.35
NF1P21359 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.85□□□□□ -0.35
NF1P21359 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NF1P21359 AL138688.1-201ENST00000624851 1594 ntBASIC12.85□□□□□ -0.35
NF1P21359 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 Z97205.2-201ENST00000564697 1639 ntBASIC12.85□□□□□ -0.35
NF1P21359 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 HOMER2P2-201ENST00000451621 847 ntBASIC12.85□□□□□ -0.35
NF1P21359 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.85□□□□□ -0.35
NF1P21359 AL161670.2-201ENST00000557650 1227 ntBASIC12.85□□□□□ -0.35
NF1P21359 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.85□□□□□ -0.35
NF1P21359 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NF1P21359 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.85□□□□□ -0.35
NF1P21359 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.84□□□□□ -0.35
NF1P21359 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.84□□□□□ -0.35
NF1P21359 HSPB1P2-201ENST00000448722 546 ntBASIC12.84□□□□□ -0.35
NF1P21359 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.84□□□□□ -0.35
NF1P21359 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 AL512652.2-201ENST00000625156 1716 ntBASIC12.84□□□□□ -0.35
NF1P21359 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.84□□□□□ -0.35
NF1P21359 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.84□□□□□ -0.35
NF1P21359 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 AC005332.8-201ENST00000622750 2735 ntBASIC12.84□□□□□ -0.35
NF1P21359 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.84□□□□□ -0.35
NF1P21359 AC053503.3-201ENST00000448375 114 ntBASIC12.84□□□□□ -0.35
NF1P21359 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 HKR1-225ENST00000592168 566 ntTSL 4 BASIC12.84□□□□□ -0.35
NF1P21359 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.84□□□□□ -0.35
NF1P21359 AC018695.6-201ENST00000614011 534 ntBASIC12.84□□□□□ -0.35
NF1P21359 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 RNF165-205ENST00000588679 2904 ntBASIC12.84□□□□□ -0.35
NF1P21359 AC005052.1-201ENST00000625181 2492 ntBASIC12.84□□□□□ -0.35
NF1P21359 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
NF1P21359 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.84□□□□□ -0.35
NF1P21359 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NF1P21359 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms