Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
NFKB1P19838 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 HLA-H-201ENST00000383620 1096 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 UPF3AP3-201ENST00000420996 769 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.43■□□□□ 0.22
NFKB1P19838 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.43■□□□□ 0.22
NFKB1P19838 AC092865.5-201ENST00000545435 363 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.43■□□□□ 0.22
NFKB1P19838 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 AC084121.4-201ENST00000641598 221 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 AF228730.8-201ENST00000642140 221 ntBASIC16.43■□□□□ 0.22
NFKB1P19838 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.43■□□□□ 0.22
NFKB1P19838 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
NFKB1P19838 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NFKB1P19838 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 AP001282.1-201ENST00000531301 1499 ntBASIC16.42■□□□□ 0.22
NFKB1P19838 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 AC004461.1-201ENST00000412461 403 ntBASIC16.42■□□□□ 0.22
NFKB1P19838 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
NFKB1P19838 AC005237.2-201ENST00000434368 219 ntBASIC16.42■□□□□ 0.22
NFKB1P19838 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.42■□□□□ 0.22
NFKB1P19838 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.42■□□□□ 0.22
NFKB1P19838 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.42■□□□□ 0.22
NFKB1P19838 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.42■□□□□ 0.22
NFKB1P19838 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
NFKB1P19838 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.42■□□□□ 0.22
NFKB1P19838 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NFKB1P19838 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
NFKB1P19838 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.41■□□□□ 0.22
NFKB1P19838 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.41■□□□□ 0.22
NFKB1P19838 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.41■□□□□ 0.22
NFKB1P19838 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.41■□□□□ 0.22
NFKB1P19838 AC093520.2-201ENST00000561830 333 ntBASIC16.41■□□□□ 0.22
NFKB1P19838 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.41■□□□□ 0.22
NFKB1P19838 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.41■□□□□ 0.22
NFKB1P19838 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 AP3S2-216ENST00000617003 1561 ntBASIC16.41■□□□□ 0.22
NFKB1P19838 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.41■□□□□ 0.22
NFKB1P19838 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NFKB1P19838 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.41■□□□□ 0.22
NFKB1P19838 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NFKB1P19838 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms