Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
KRT4P19013 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
KRT4P19013 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
KRT4P19013 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
KRT4P19013 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.25■□□□□ 0.19
KRT4P19013 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT4P19013 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
KRT4P19013 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT4P19013 FAM45BP-202ENST00000592932 1624 ntBASIC16.24■□□□□ 0.19
KRT4P19013 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 AC011477.6-201ENST00000604980 1927 ntBASIC16.24■□□□□ 0.19
KRT4P19013 AL009178.2-201ENST00000597278 2719 ntBASIC16.24■□□□□ 0.19
KRT4P19013 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT4P19013 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT4P19013 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 AC021087.4-201ENST00000563761 564 ntBASIC16.24■□□□□ 0.19
KRT4P19013 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.24■□□□□ 0.19
KRT4P19013 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT4P19013 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
KRT4P19013 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
KRT4P19013 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
KRT4P19013 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.24■□□□□ 0.19
KRT4P19013 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
KRT4P19013 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
KRT4P19013 CICP24-201ENST00000605464 2705 ntBASIC16.24■□□□□ 0.19
KRT4P19013 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 AC090616.6-203ENST00000579186 1945 ntBASIC16.23■□□□□ 0.19
KRT4P19013 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 AC073621.1-201ENST00000392730 636 ntBASIC16.23■□□□□ 0.19
KRT4P19013 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.23■□□□□ 0.19
KRT4P19013 KRT18P27-201ENST00000427733 1299 ntBASIC16.23■□□□□ 0.19
KRT4P19013 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT4P19013 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT4P19013 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.23■□□□□ 0.19
KRT4P19013 AC008667.4-201ENST00000607370 168 ntBASIC16.23■□□□□ 0.19
KRT4P19013 AC091076.1-201ENST00000610741 619 ntBASIC16.23■□□□□ 0.19
KRT4P19013 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 AC105250.1-201ENST00000509378 2057 ntBASIC16.23■□□□□ 0.19
KRT4P19013 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.23■□□□□ 0.19
KRT4P19013 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.23■□□□□ 0.19
KRT4P19013 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
KRT4P19013 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT4P19013 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
KRT4P19013 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT4P19013 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT4P19013 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms