Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.21□□□□□ -0.29
DEFA4P12838 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
DEFA4P12838 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DEFA4P12838 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.21□□□□□ -0.3
DEFA4P12838 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.21□□□□□ -0.3
DEFA4P12838 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.21□□□□□ -0.3
DEFA4P12838 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
DEFA4P12838 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 TNRC18P2-201ENST00000417666 2714 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
DEFA4P12838 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DEFA4P12838 AC073621.1-201ENST00000392730 636 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.2□□□□□ -0.3
DEFA4P12838 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.2□□□□□ -0.3
DEFA4P12838 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC13.2□□□□□ -0.3
DEFA4P12838 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 REXO1L3P-201ENST00000622202 1288 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 TP73-AS1-207ENST00000624167 988 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
DEFA4P12838 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 KRT8P39-201ENST00000396270 1433 ntBASIC13.2□□□□□ -0.3
DEFA4P12838 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
DEFA4P12838 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.2□□□□□ -0.3
DEFA4P12838 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
DEFA4P12838 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA4P12838 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.19□□□□□ -0.3
DEFA4P12838 AL671710.1-201ENST00000610245 2349 ntBASIC13.19□□□□□ -0.3
DEFA4P12838 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DEFA4P12838 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
DEFA4P12838 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
DEFA4P12838 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
DEFA4P12838 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
DEFA4P12838 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.19□□□□□ -0.3
DEFA4P12838 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
DEFA4P12838 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
DEFA4P12838 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DEFA4P12838 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.19□□□□□ -0.3
DEFA4P12838 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms