Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
KRT3P12035 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT3P12035 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
KRT3P12035 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT3P12035 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT3P12035 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT3P12035 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 FAM220BP-201ENST00000377689 816 ntBASIC17.02■□□□□ 0.32
KRT3P12035 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT3P12035 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT3P12035 RPSAP43-201ENST00000402237 625 ntBASIC17.02■□□□□ 0.32
KRT3P12035 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT3P12035 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
KRT3P12035 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT3P12035 AC069335.1-201ENST00000489972 472 ntBASIC17.02■□□□□ 0.32
KRT3P12035 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.02■□□□□ 0.32
KRT3P12035 RNA5SP410-201ENST00000516285 106 ntBASIC17.02■□□□□ 0.32
KRT3P12035 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT3P12035 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
KRT3P12035 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT3P12035 AC022145.2-201ENST00000598203 171 ntBASIC17.02■□□□□ 0.32
KRT3P12035 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT3P12035 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
KRT3P12035 AC084121.4-201ENST00000641598 221 ntBASIC17.02■□□□□ 0.32
KRT3P12035 AF228730.8-201ENST00000642140 221 ntBASIC17.02■□□□□ 0.32
KRT3P12035 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT3P12035 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KRT3P12035 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT3P12035 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
KRT3P12035 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
KRT3P12035 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT3P12035 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.02■□□□□ 0.31
KRT3P12035 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT3P12035 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.31
KRT3P12035 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT3P12035 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 UPF3AP3-201ENST00000420996 769 ntBASIC17.01■□□□□ 0.31
KRT3P12035 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
KRT3P12035 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT3P12035 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT3P12035 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.01■□□□□ 0.31
KRT3P12035 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.01■□□□□ 0.31
KRT3P12035 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
KRT3P12035 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT3P12035 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
KRT3P12035 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
KRT3P12035 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17■□□□□ 0.31
KRT3P12035 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms