Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MT-ND3P03897 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.53■□□□□ 0.24
MT-ND3P03897 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
MT-ND3P03897 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
MT-ND3P03897 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND3P03897 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND3P03897 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND3P03897 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND3P03897 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND3P03897 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 SLC25A6P2-201ENST00000497974 877 ntBASIC16.52■□□□□ 0.24
MT-ND3P03897 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-ND3P03897 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND3P03897 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-ND3P03897 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND3P03897 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
MT-ND3P03897 AC010327.4-202ENST00000591484 748 ntBASIC16.52■□□□□ 0.24
MT-ND3P03897 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.52■□□□□ 0.24
MT-ND3P03897 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND3P03897 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND3P03897 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND3P03897 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND3P03897 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
MT-ND3P03897 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND3P03897 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND3P03897 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND3P03897 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.51■□□□□ 0.23
MT-ND3P03897 PRSS29P-201ENST00000440800 595 ntBASIC16.51■□□□□ 0.23
MT-ND3P03897 AC092183.1-201ENST00000469884 875 ntBASIC16.51■□□□□ 0.23
MT-ND3P03897 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 AC008667.4-201ENST00000607370 168 ntBASIC16.51■□□□□ 0.23
MT-ND3P03897 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 MIR600HG-201ENST00000449175 5984 ntBASIC16.51■□□□□ 0.23
MT-ND3P03897 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND3P03897 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND3P03897 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND3P03897 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND3P03897 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND3P03897 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MT-ND3P03897 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND3P03897 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND3P03897 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND3P03897 AP003680.1-201ENST00000598970 3660 ntBASIC16.5■□□□□ 0.23
MT-ND3P03897 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms