Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 METTL21AP1-201ENST00000438852 635 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 KRT18P34-201ENST00000488218 1270 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.12■□□□□ 0.01
TRIM3O75382 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 AC009093.7-201ENST00000623853 1223 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 AC008267.7-201ENST00000624570 1194 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 AC084121.4-201ENST00000641598 221 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 AF228730.8-201ENST00000642140 221 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.12■□□□□ 0.01
TRIM3O75382 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRIM3O75382 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.12■□□□□ 0.01
TRIM3O75382 AL512652.2-201ENST00000625156 1716 ntBASIC15.12■□□□□ 0.01
TRIM3O75382 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 AL139400.1-201ENST00000366220 510 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 TSEN15P1-201ENST00000423257 515 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM3O75382 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 HLA-J-203ENST00000494367 1087 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 IGHV3-62-201ENST00000520057 340 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM3O75382 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM3O75382 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.11■□□□□ 0.01
TRIM3O75382 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 AC079328.2-201ENST00000561241 3354 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 LINC02228-204ENST00000642115 2962 ntBASIC15.11■□□□□ 0.01
TRIM3O75382 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.11■□□□□ 0.01
TRIM3O75382 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRIM3O75382 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.11■□□□□ 0.01
TRIM3O75382 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRIM3O75382 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TRIM3O75382 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRIM3O75382 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.1■□□□□ 0.01
TRIM3O75382 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms