Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.36□□□□□ -0.11
GMDSO60547 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
GMDSO60547 FAM185BP-201ENST00000443595 716 ntBASIC14.36□□□□□ -0.11
GMDSO60547 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 CXCL1P1-201ENST00000502804 216 ntBASIC14.36□□□□□ -0.11
GMDSO60547 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.36□□□□□ -0.11
GMDSO60547 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.36□□□□□ -0.11
GMDSO60547 AC087641.1-201ENST00000557561 1021 ntBASIC14.36□□□□□ -0.11
GMDSO60547 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 CYP2A7P1-201ENST00000595391 815 ntBASIC14.36□□□□□ -0.11
GMDSO60547 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.36□□□□□ -0.11
GMDSO60547 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 IL9RP2-201ENST00000423948 1312 ntBASIC14.36□□□□□ -0.11
GMDSO60547 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
GMDSO60547 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.36□□□□□ -0.11
GMDSO60547 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GMDSO60547 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 GGT4P-201ENST00000623672 1708 ntBASIC14.35□□□□□ -0.11
GMDSO60547 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.35□□□□□ -0.11
GMDSO60547 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 AL009178.2-201ENST00000597278 2719 ntBASIC14.35□□□□□ -0.11
GMDSO60547 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 AL590627.1-203ENST00000421194 1026 ntBASIC14.35□□□□□ -0.11
GMDSO60547 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 RPL13AP23-201ENST00000480739 586 ntBASIC14.35□□□□□ -0.11
GMDSO60547 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.35□□□□□ -0.11
GMDSO60547 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
GMDSO60547 BX640515.1-201ENST00000617215 977 ntBASIC14.35□□□□□ -0.11
GMDSO60547 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.35□□□□□ -0.11
GMDSO60547 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.35□□□□□ -0.11
GMDSO60547 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GMDSO60547 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.35□□□□□ -0.11
GMDSO60547 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GMDSO60547 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.34□□□□□ -0.11
GMDSO60547 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GMDSO60547 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GMDSO60547 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms