Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB2O43679 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB2O43679 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB2O43679 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB2O43679 AL139010.1-201ENST00000454878 894 ntBASIC16.11■□□□□ 0.17
LDB2O43679 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 BANF1P1-201ENST00000553684 263 ntBASIC16.11■□□□□ 0.17
LDB2O43679 SNHG9-202ENST00000564014 471 ntBASIC16.11■□□□□ 0.17
LDB2O43679 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 AC018529.1-201ENST00000613063 361 ntBASIC16.11■□□□□ 0.17
LDB2O43679 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 CYP4F24P-201ENST00000586049 1580 ntBASIC16.11■□□□□ 0.17
LDB2O43679 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.11■□□□□ 0.17
LDB2O43679 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 AC046158.3-201ENST00000624947 2558 ntBASIC16.11■□□□□ 0.17
LDB2O43679 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LDB2O43679 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB2O43679 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB2O43679 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.1■□□□□ 0.17
LDB2O43679 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LDB2O43679 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB2O43679 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.1■□□□□ 0.17
LDB2O43679 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.1■□□□□ 0.17
LDB2O43679 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LDB2O43679 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LDB2O43679 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.1■□□□□ 0.17
LDB2O43679 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LDB2O43679 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 AP003680.1-201ENST00000598970 3660 ntBASIC16.09■□□□□ 0.17
LDB2O43679 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LDB2O43679 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.09■□□□□ 0.17
LDB2O43679 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.09■□□□□ 0.17
LDB2O43679 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.09■□□□□ 0.17
LDB2O43679 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LDB2O43679 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms