Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.03□□□□□ -0.16
PHF1O43189 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 TSPY16P-201ENST00000449843 468 ntBASIC14.03□□□□□ -0.16
PHF1O43189 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.03□□□□□ -0.16
PHF1O43189 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 AC024909.3-201ENST00000611513 2257 ntBASIC14.03□□□□□ -0.16
PHF1O43189 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 AC103702.1-201ENST00000548801 2630 ntBASIC14.03□□□□□ -0.16
PHF1O43189 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.03□□□□□ -0.16
PHF1O43189 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PHF1O43189 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PHF1O43189 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PHF1O43189 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
PHF1O43189 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PHF1O43189 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.02□□□□□ -0.16
PHF1O43189 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PHF1O43189 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
PHF1O43189 MTHFR-217ENST00000641820 1569 ntBASIC14.02□□□□□ -0.16
PHF1O43189 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PHF1O43189 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.02□□□□□ -0.17
PHF1O43189 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.02□□□□□ -0.17
PHF1O43189 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.02□□□□□ -0.17
PHF1O43189 RN7SL204P-201ENST00000582831 262 ntBASIC14.02□□□□□ -0.17
PHF1O43189 AC015911.4-201ENST00000588022 1070 ntBASIC14.02□□□□□ -0.17
PHF1O43189 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
PHF1O43189 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
PHF1O43189 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PHF1O43189 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.02□□□□□ -0.17
PHF1O43189 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.02□□□□□ -0.17
PHF1O43189 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHF1O43189 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHF1O43189 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHF1O43189 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.01□□□□□ -0.17
PHF1O43189 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHF1O43189 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.01□□□□□ -0.17
PHF1O43189 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PHF1O43189 AC006538.1-201ENST00000567905 1585 ntBASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms