Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.11■□□□□ 0.17
PHGDHO43175 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PHGDHO43175 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PHGDHO43175 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.1■□□□□ 0.17
PHGDHO43175 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.1■□□□□ 0.17
PHGDHO43175 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.1■□□□□ 0.17
PHGDHO43175 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.1■□□□□ 0.17
PHGDHO43175 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.1■□□□□ 0.17
PHGDHO43175 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.1■□□□□ 0.17
PHGDHO43175 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.1■□□□□ 0.17
PHGDHO43175 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.1■□□□□ 0.17
PHGDHO43175 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PHGDHO43175 CICP13-201ENST00000422015 2789 ntBASIC16.09■□□□□ 0.17
PHGDHO43175 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.09■□□□□ 0.17
PHGDHO43175 PPT1-215ENST00000641471 2368 ntBASIC16.09■□□□□ 0.17
PHGDHO43175 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.09■□□□□ 0.17
PHGDHO43175 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHGDHO43175 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHGDHO43175 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHGDHO43175 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PHGDHO43175 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PHGDHO43175 AC145285.3-201ENST00000564603 959 ntBASIC16.09■□□□□ 0.17
PHGDHO43175 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.09■□□□□ 0.17
PHGDHO43175 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.09■□□□□ 0.17
PHGDHO43175 AL589702.1-201ENST00000641229 1509 ntBASIC16.09■□□□□ 0.17
PHGDHO43175 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PHGDHO43175 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PHGDHO43175 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.08■□□□□ 0.17
PHGDHO43175 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.08■□□□□ 0.17
PHGDHO43175 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PHGDHO43175 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
PHGDHO43175 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PHGDHO43175 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PHGDHO43175 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.08■□□□□ 0.16
PHGDHO43175 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.08■□□□□ 0.16
PHGDHO43175 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.08■□□□□ 0.16
PHGDHO43175 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.08■□□□□ 0.16
PHGDHO43175 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.08■□□□□ 0.16
PHGDHO43175 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.08■□□□□ 0.16
PHGDHO43175 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PHGDHO43175 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms