Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB6Q9Y5F9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AL391256.1-201ENST00000443260 1855 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 KRT18P32-201ENST00000424695 1287 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CNN2P2-201ENST00000443536 909 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CNN2P3-201ENST00000450201 906 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 LINC01225-203ENST00000563550 1244 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AL031055.1-201ENST00000606362 631 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AL136317.3-201ENST00000618497 906 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 AC006277.1-201ENST00000624348 1610 ntBASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB6Q9Y5F9 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB6Q9Y5F9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB6Q9Y5F9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB6Q9Y5F9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB6Q9Y5F9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB6Q9Y5F9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 SPCS2P4-201ENST00000436160 681 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 IGHV3-62-201ENST00000520057 340 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 SPCS2P1-201ENST00000561636 679 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 MPDU1-223ENST00000582151 728 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AC239800.4-201ENST00000603712 296 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AL096865.1-201ENST00000606796 927 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 AC131009.4-201ENST00000624048 1740 ntBASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB6Q9Y5F9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms