Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 AC015911.4-201ENST00000588022 1070 ntBASIC17.19■□□□□ 0.34
CISHQ9NSE2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.19■□□□□ 0.34
CISHQ9NSE2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 TUBB3P1-201ENST00000405796 1332 ntBASIC17.19■□□□□ 0.34
CISHQ9NSE2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CISHQ9NSE2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CISHQ9NSE2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 AC011477.6-201ENST00000604980 1927 ntBASIC17.18■□□□□ 0.34
CISHQ9NSE2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 MTND6P24-201ENST00000440466 518 ntBASIC17.18■□□□□ 0.34
CISHQ9NSE2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CISHQ9NSE2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CISHQ9NSE2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 AC051619.7-201ENST00000568314 623 ntBASIC17.17■□□□□ 0.34
CISHQ9NSE2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms