Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC103564.2-201ENST00000432853 1299 ntBASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC109462.3-201ENST00000573934 613 ntBASIC13.15□□□□□ -0.3
NKX6-2Q9C056 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 FGD5P1-202ENST00000614866 2498 ntBASIC13.15□□□□□ -0.3
NKX6-2Q9C056 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
NKX6-2Q9C056 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-2Q9C056 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-2Q9C056 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-2Q9C056 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
NKX6-2Q9C056 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NKX6-2Q9C056 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.14□□□□□ -0.31
NKX6-2Q9C056 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 AC068472.1-201ENST00000474589 881 ntBASIC13.14□□□□□ -0.31
NKX6-2Q9C056 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.14□□□□□ -0.31
NKX6-2Q9C056 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
NKX6-2Q9C056 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 AJ011931.1-201ENST00000618749 2492 ntBASIC13.13□□□□□ -0.31
NKX6-2Q9C056 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.13□□□□□ -0.31
NKX6-2Q9C056 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms