Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AC087641.1-201ENST00000557561 1021 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SIGLEC29P-201ENST00000599873 1114 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AC025062.2-201ENST00000605477 670 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AL359183.1-201ENST00000623796 2132 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AKR1C7P-201ENST00000305623 895 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 KRT18P67-201ENST00000432816 1264 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 SKP2-204ENST00000508514 821 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AC105339.3-201ENST00000560043 636 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 AL121912.1-201ENST00000603683 238 ntBASIC9.7□□□□□ -0.86
LIMD2Q9BT23 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC9.7□□□□□ -0.86
LIMD2Q9BT23 BSG-214ENST00000614867 960 ntTSL 3 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms