Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RARRES2P9-201ENST00000565168 469 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 AP003680.1-201ENST00000598970 3660 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.11■□□□□ 0.65
NEK1Q96PY6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK1Q96PY6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK1Q96PY6 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NEK1Q96PY6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK1Q96PY6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 KRT18P32-201ENST00000424695 1287 ntBASIC19.09■□□□□ 0.65
NEK1Q96PY6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 AC243562.2-201ENST00000561247 970 ntBASIC19.09■□□□□ 0.65
NEK1Q96PY6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 AC004835.2-201ENST00000603762 682 ntBASIC19.09■□□□□ 0.65
NEK1Q96PY6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
NEK1Q96PY6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK1Q96PY6 AL136982.4-201ENST00000437689 1740 ntBASIC19.08■□□□□ 0.65
NEK1Q96PY6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NEK1Q96PY6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK1Q96PY6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK1Q96PY6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NEK1Q96PY6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NEK1Q96PY6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.08■□□□□ 0.65
NEK1Q96PY6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 PMS2P2-201ENST00000425039 1128 ntBASIC19.08■□□□□ 0.64
NEK1Q96PY6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms