Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TUBB8P12-201ENST00000308911 1335 ntBASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TUBB7P-202ENST00000428444 1305 ntBASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TUBB8P7-204ENST00000567960 1332 ntBASIC14.66□□□□□ -0.06
LRRC46Q96FV0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.65□□□□□ -0.06
LRRC46Q96FV0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 AC016027.1-202ENST00000607927 1699 ntBASIC14.65□□□□□ -0.06
LRRC46Q96FV0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.65□□□□□ -0.06
LRRC46Q96FV0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 FO538757.1-201ENST00000623083 1397 ntBASIC14.65□□□□□ -0.06
LRRC46Q96FV0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LRRC46Q96FV0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
LRRC46Q96FV0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 MIR346-201ENST00000362234 95 ntBASIC14.64□□□□□ -0.07
LRRC46Q96FV0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.64□□□□□ -0.07
LRRC46Q96FV0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms