Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL121772.3-201ENST00000610840 674 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AL355877.3-201ENST00000622820 899 ntBASIC14.39□□□□□ -0.11
RFT1Q96AA3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFT1Q96AA3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFT1Q96AA3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.38□□□□□ -0.11
RFT1Q96AA3 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 PTCHD3P3-201ENST00000403073 906 ntBASIC14.38□□□□□ -0.11
RFT1Q96AA3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 FGFR3P6-201ENST00000457012 610 ntBASIC14.38□□□□□ -0.11
RFT1Q96AA3 AC087163.2-201ENST00000457299 853 ntBASIC14.38□□□□□ -0.11
RFT1Q96AA3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 PRELID1P1-202ENST00000567272 903 ntBASIC14.38□□□□□ -0.11
RFT1Q96AA3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFT1Q96AA3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RFT1Q96AA3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 SNX33P1-201ENST00000592116 1762 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 AC016027.1-202ENST00000607927 1699 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.37□□□□□ -0.11
RFT1Q96AA3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RFT1Q96AA3 ELK2BP-201ENST00000415014 1224 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 PAWRP1-201ENST00000451083 565 ntBASIC14.37□□□□□ -0.11
RFT1Q96AA3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms