Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 MIR940-201ENST00000401276 94 ntBASIC14.19□□□□□ -0.14
SPTSSAQ969W0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
SPTSSAQ969W0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC112504.1-201ENST00000623415 1841 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 TSPY26P-202ENST00000565928 3884 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AL671277.1-201ENST00000429656 993 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 RN7SL589P-201ENST00000481268 310 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC105233.2-201ENST00000523697 349 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 KRT18P58-201ENST00000527480 1120 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AF228730.5-201ENST00000530288 346 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC024267.1-201ENST00000582320 895 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 MIR4321-201ENST00000592276 80 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC099522.2-201ENST00000607001 744 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 AC091812.2-201ENST00000619081 385 ntBASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSAQ969W0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms