Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAPGEF4Q8WZA2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 OR6D1P-203ENST00000641209 4860 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AC005229.1-201ENST00000392885 409 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 ACTBP11-201ENST00000436287 1126 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 SLED1-202ENST00000512051 380 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AC068587.3-201ENST00000526613 355 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AL583810.1-201ENST00000553344 1045 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 MIR4538-201ENST00000581377 78 ntBASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAPGEF4Q8WZA2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20.96■□□□□ 0.95
RAPGEF4Q8WZA2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
RAPGEF4Q8WZA2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
RAPGEF4Q8WZA2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms