Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 RFPL4AP1-201ENST00000530883 850 ntBASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 AC024267.1-201ENST00000582320 895 ntBASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 U82695.1-201ENST00000635752 1889 ntBASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 AL589702.1-201ENST00000641229 1509 ntBASIC16.86■□□□□ 0.29
TTC39BQ5VTQ0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 AP3S2-216ENST00000617003 1561 ntBASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TTC39BQ5VTQ0 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.84■□□□□ 0.29
TTC39BQ5VTQ0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms