Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 HLA-H-201ENST00000383620 1096 ntBASIC16.74■□□□□ 0.27
LRRC38Q5VT99 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 AC079140.1-201ENST00000508039 487 ntBASIC16.74■□□□□ 0.27
LRRC38Q5VT99 PGAM5P1-201ENST00000518923 814 ntBASIC16.74■□□□□ 0.27
LRRC38Q5VT99 KRT18P58-201ENST00000527480 1120 ntBASIC16.74■□□□□ 0.27
LRRC38Q5VT99 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.74■□□□□ 0.27
LRRC38Q5VT99 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRC38Q5VT99 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 PPT1-215ENST00000641471 2368 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 YBX2P1-201ENST00000394192 760 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 MKNK2P1-201ENST00000437526 628 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SPDYE11-202ENST00000450699 704 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 KRT8P48-201ENST00000515599 1220 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 RNA5SP410-201ENST00000516285 106 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SPDYE9P-201ENST00000570642 692 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SPDYE10P-202ENST00000612005 668 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SPDYE8P-202ENST00000612377 668 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AC073347.1-201ENST00000421633 2643 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 AC013268.4-201ENST00000637413 2228 ntBASIC16.73■□□□□ 0.27
LRRC38Q5VT99 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRC38Q5VT99 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 REXO1L1P-202ENST00000608646 1974 ntBASIC16.72■□□□□ 0.27
LRRC38Q5VT99 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRC38Q5VT99 EEF1DP4-201ENST00000446006 880 ntBASIC16.72■□□□□ 0.27
LRRC38Q5VT99 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms