Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 BAD-207ENST00000544785 525 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 AC140878.1-201ENST00000565277 250 ntBASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 AL513523.2-202ENST00000427283 2040 ntBASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 AC126755.1-201ENST00000525846 6405 ntBASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 AC079328.2-201ENST00000561241 3354 ntBASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01556Q5JQF7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 AL691432.1-201ENST00000596308 1422 ntBASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 PMS2P2-201ENST00000425039 1128 ntBASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 AC051619.7-201ENST00000568314 623 ntBASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01556Q5JQF7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 AC124067.4-201ENST00000519691 2379 ntBASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CETN4P-206ENST00000642099 2168 ntBASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms