Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC026396.1-201ENST00000419388 421 ntBASIC8.2□□□□□ -1.1
LINC01554Q52M75 PPP1R14BP5-201ENST00000440334 435 ntBASIC8.2□□□□□ -1.1
LINC01554Q52M75 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 GLRB-205ENST00000512619 728 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CFL2-205ENST00000555765 632 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC142086.2-201ENST00000569753 217 ntBASIC8.2□□□□□ -1.1
LINC01554Q52M75 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 ABBA01031674.1-201ENST00000635145 728 ntBASIC8.2□□□□□ -1.1
LINC01554Q52M75 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 TPO-203ENST00000346956 2923 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC8.2□□□□□ -1.1
LINC01554Q52M75 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LINC01554Q52M75 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 AC009102.3-201ENST00000623118 1491 ntBASIC8.19□□□□□ -1.1
LINC01554Q52M75 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LINC01554Q52M75 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
LINC01554Q52M75 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms