Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS3AP61247 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS3AP61247 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.24■□□□□ 0.03
RPS3AP61247 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RPS3AP61247 MTHFR-217ENST00000641820 1569 ntBASIC15.24■□□□□ 0.03
RPS3AP61247 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RPS3AP61247 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.23■□□□□ 0.03
RPS3AP61247 AC023274.1-201ENST00000418278 595 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 AC004832.2-201ENST00000426397 482 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 RHOQP3-201ENST00000437982 621 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 KRT18P2-201ENST00000447938 1258 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 AL513480.1-201ENST00000451731 511 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 AC005412.3-201ENST00000580309 715 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.23■□□□□ 0.03
RPS3AP61247 AC023511.2-201ENST00000618803 211 ntBASIC15.23■□□□□ 0.03
RPS3AP61247 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.23■□□□□ 0.03
RPS3AP61247 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
RPS3AP61247 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
RPS3AP61247 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RPS3AP61247 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.23■□□□□ 0.03
RPS3AP61247 FRMD8P1-201ENST00000440433 1524 ntBASIC15.22■□□□□ 0.03
RPS3AP61247 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS3AP61247 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.22■□□□□ 0.03
RPS3AP61247 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 AC004877.2-201ENST00000623941 599 ntBASIC15.22■□□□□ 0.03
RPS3AP61247 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.22■□□□□ 0.03
RPS3AP61247 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.22■□□□□ 0.03
RPS3AP61247 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
RPS3AP61247 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RPS3AP61247 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
RPS3AP61247 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.21■□□□□ 0.03
RPS3AP61247 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RPS3AP61247 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.21■□□□□ 0.03
RPS3AP61247 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPS3AP61247 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms