Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RIPPLY3P57055 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIPPLY3P57055 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RIPPLY3P57055 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIPPLY3P57055 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.26
RIPPLY3P57055 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RIPPLY3P57055 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RIPPLY3P57055 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 RPL13AP19-201ENST00000434320 584 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 AL133466.1-201ENST00000447582 150 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 SERBP1P3-201ENST00000459980 809 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 BANF1P1-201ENST00000553684 263 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 AL079307.3-201ENST00000556114 283 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 AC005412.3-201ENST00000580309 715 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 PCDH8P1-201ENST00000428983 2773 ntBASIC13.45□□□□□ -0.26
RIPPLY3P57055 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.45□□□□□ -0.26
RIPPLY3P57055 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RIPPLY3P57055 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 AC012569.1-201ENST00000591191 1524 ntBASIC13.44□□□□□ -0.26
RIPPLY3P57055 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.44□□□□□ -0.26
RIPPLY3P57055 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 FAU-202ENST00000434372 533 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 FTLP10-202ENST00000505798 471 ntBASIC13.44□□□□□ -0.26
RIPPLY3P57055 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 AC107918.2-201ENST00000530817 355 ntBASIC13.44□□□□□ -0.26
RIPPLY3P57055 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 EGFEM1P-202ENST00000431685 1563 ntBASIC13.44□□□□□ -0.26
RIPPLY3P57055 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RIPPLY3P57055 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RIPPLY3P57055 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms