Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 FAM58DP-201ENST00000428076 619 ntBASIC14.86□□□□□ -0.03
CLDN20P56880 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN20P56880 AC023141.5-201ENST00000458585 616 ntBASIC14.86□□□□□ -0.03
CLDN20P56880 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN20P56880 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.86□□□□□ -0.03
CLDN20P56880 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 AC008267.7-201ENST00000624570 1194 ntBASIC14.86□□□□□ -0.03
CLDN20P56880 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
CLDN20P56880 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 KRT18P28-201ENST00000453838 1332 ntBASIC14.86□□□□□ -0.03
CLDN20P56880 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN20P56880 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CLDN20P56880 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN20P56880 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN20P56880 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.85□□□□□ -0.03
CLDN20P56880 METTL21AP1-201ENST00000438852 635 ntBASIC14.85□□□□□ -0.03
CLDN20P56880 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.85□□□□□ -0.03
CLDN20P56880 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
CLDN20P56880 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.85□□□□□ -0.03
CLDN20P56880 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.85□□□□□ -0.03
CLDN20P56880 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.85□□□□□ -0.03
CLDN20P56880 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CLDN20P56880 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CLDN20P56880 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 AC006058.4-201ENST00000624016 1670 ntBASIC14.84□□□□□ -0.03
CLDN20P56880 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.84□□□□□ -0.03
CLDN20P56880 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms