Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.74□□□□□ -0.05
CENPAP49450 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 AC018712.1-201ENST00000455767 687 ntBASIC14.74□□□□□ -0.05
CENPAP49450 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.74□□□□□ -0.05
CENPAP49450 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.74□□□□□ -0.05
CENPAP49450 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.74□□□□□ -0.05
CENPAP49450 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.74□□□□□ -0.05
CENPAP49450 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.74□□□□□ -0.05
CENPAP49450 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 REXO1L8P-201ENST00000604378 1897 ntBASIC14.74□□□□□ -0.05
CENPAP49450 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CENPAP49450 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
CENPAP49450 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CENPAP49450 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.73□□□□□ -0.05
CENPAP49450 AL513480.1-201ENST00000451731 511 ntBASIC14.73□□□□□ -0.05
CENPAP49450 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.73□□□□□ -0.05
CENPAP49450 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.73□□□□□ -0.05
CENPAP49450 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.73□□□□□ -0.05
CENPAP49450 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.73□□□□□ -0.05
CENPAP49450 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 AL691432.3-201ENST00000621860 400 ntBASIC14.73□□□□□ -0.05
CENPAP49450 AC117500.6-201ENST00000624871 588 ntBASIC14.73□□□□□ -0.05
CENPAP49450 FAM215A-202ENST00000632077 792 ntBASIC14.73□□□□□ -0.05
CENPAP49450 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.73□□□□□ -0.05
CENPAP49450 PRAL-201ENST00000624952 3286 ntBASIC14.73□□□□□ -0.05
CENPAP49450 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.73□□□□□ -0.05
CENPAP49450 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CENPAP49450 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.73□□□□□ -0.05
CENPAP49450 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CENPAP49450 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CENPAP49450 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms