Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF9P41273 FAM8A3P-201ENST00000427218 844 ntBASIC17.41■□□□□ 0.38
TNFSF9P41273 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF9P41273 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF9P41273 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TNFSF9P41273 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TNFSF9P41273 AC010491.1-201ENST00000563101 2797 ntBASIC17.41■□□□□ 0.38
TNFSF9P41273 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.41■□□□□ 0.38
TNFSF9P41273 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.41■□□□□ 0.38
TNFSF9P41273 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNFSF9P41273 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TNFSF9P41273 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TNFSF9P41273 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.41■□□□□ 0.38
TNFSF9P41273 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
TNFSF9P41273 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TNFSF9P41273 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TNFSF9P41273 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 AL391005.1-201ENST00000623953 2435 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 DOC2GP-204ENST00000639052 2548 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFSF9P41273 EEF1DP4-201ENST00000446006 880 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 TSPY16P-201ENST00000449843 468 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 RN7SL618P-201ENST00000477850 296 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.4■□□□□ 0.38
TNFSF9P41273 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 AC044860.1-202ENST00000559481 777 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TNFSF9P41273 MIR4745-201ENST00000577608 62 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 AC004840.1-201ENST00000636359 365 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 CDC14C-201ENST00000428251 1719 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 AC069224.1-201ENST00000566372 1715 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFSF9P41273 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TNFSF9P41273 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.4■□□□□ 0.38
TNFSF9P41273 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
TNFSF9P41273 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.4■□□□□ 0.38
TNFSF9P41273 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TNFSF9P41273 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
TNFSF9P41273 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNFSF9P41273 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TNFSF9P41273 AL603832.2-201ENST00000566195 2125 ntBASIC17.39■□□□□ 0.38
TNFSF9P41273 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TNFSF9P41273 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 AC018695.7-201ENST00000624587 2492 ntBASIC17.39■□□□□ 0.37
TNFSF9P41273 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TNFSF9P41273 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TNFSF9P41273 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFSF9P41273 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFSF9P41273 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TNFSF9P41273 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFSF9P41273 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.39■□□□□ 0.37
TNFSF9P41273 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFSF9P41273 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.39■□□□□ 0.37
TNFSF9P41273 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFSF9P41273 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.39■□□□□ 0.37
TNFSF9P41273 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TNFSF9P41273 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.39■□□□□ 0.37
TNFSF9P41273 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 LINC02447-202ENST00000501888 2146 ntBASIC17.39■□□□□ 0.37
TNFSF9P41273 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TNFSF9P41273 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
TNFSF9P41273 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms