Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 FAM220BP-201ENST00000377689 816 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 RPS8P6-201ENST00000426177 609 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 DNAJB3-202ENST00000449667 1266 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 AC023141.5-201ENST00000458585 616 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.23□□□□□ -0.29
CEACAM3P40198 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CEACAM3P40198 LINC01225-203ENST00000563550 1244 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 AL596442.2-201ENST00000610240 980 ntBASIC13.23□□□□□ -0.29
CEACAM3P40198 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.23□□□□□ -0.29
CEACAM3P40198 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CEACAM3P40198 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.23□□□□□ -0.29
CEACAM3P40198 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CEACAM3P40198 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CEACAM3P40198 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CEACAM3P40198 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.22□□□□□ -0.29
CEACAM3P40198 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CEACAM3P40198 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 AC142381.1-201ENST00000426099 345 ntBASIC13.22□□□□□ -0.29
CEACAM3P40198 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.22□□□□□ -0.29
CEACAM3P40198 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CEACAM3P40198 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CEACAM3P40198 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.22□□□□□ -0.29
CEACAM3P40198 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.22□□□□□ -0.29
CEACAM3P40198 AC026979.3-201ENST00000607315 403 ntBASIC13.22□□□□□ -0.29
CEACAM3P40198 AC009093.7-201ENST00000623853 1223 ntBASIC13.22□□□□□ -0.29
CEACAM3P40198 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 AC005052.1-201ENST00000625181 2492 ntBASIC13.22□□□□□ -0.29
CEACAM3P40198 AC079328.2-201ENST00000561241 3354 ntBASIC13.22□□□□□ -0.29
CEACAM3P40198 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.22□□□□□ -0.29
CEACAM3P40198 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CEACAM3P40198 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.21□□□□□ -0.29
CEACAM3P40198 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CEACAM3P40198 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms