Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC8P31273 BAATP1-201ENST00000412284 1225 ntBASIC17.38■□□□□ 0.37
HOXC8P31273 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.38■□□□□ 0.37
HOXC8P31273 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXC8P31273 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC8P31273 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 GAPDHP40-201ENST00000505218 1006 ntBASIC17.38■□□□□ 0.37
HOXC8P31273 RNA5SP412-201ENST00000516234 123 ntBASIC17.38■□□□□ 0.37
HOXC8P31273 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.38■□□□□ 0.37
HOXC8P31273 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HOXC8P31273 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXC8P31273 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.38■□□□□ 0.37
HOXC8P31273 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
HOXC8P31273 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.38■□□□□ 0.37
HOXC8P31273 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HOXC8P31273 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC8P31273 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC8P31273 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC8P31273 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 FAM86MP-201ENST00000340703 885 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 MIR1908-201ENST00000410394 80 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 CSF2RBP1-201ENST00000447905 391 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXC8P31273 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
HOXC8P31273 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
HOXC8P31273 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.37■□□□□ 0.37
HOXC8P31273 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.37■□□□□ 0.37
HOXC8P31273 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.37■□□□□ 0.37
HOXC8P31273 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.37■□□□□ 0.37
HOXC8P31273 AC015910.1-201ENST00000579400 975 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 TUBB1P2-201ENST00000422712 1306 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 TUBB1P1-201ENST00000503144 1300 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HOXC8P31273 AC018892.3-201ENST00000623986 2499 ntBASIC17.37■□□□□ 0.37
HOXC8P31273 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
HOXC8P31273 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.36■□□□□ 0.37
HOXC8P31273 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HOXC8P31273 ACKR1-201ENST00000368121 1240 ntBASIC17.36■□□□□ 0.37
HOXC8P31273 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HOXC8P31273 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HOXC8P31273 AL133267.1-201ENST00000398220 340 ntBASIC17.36■□□□□ 0.37
HOXC8P31273 AC093433.1-201ENST00000458048 571 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms