Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.02□□□□□ -0.01
LCN1P31025 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.02□□□□□ -0.01
LCN1P31025 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LCN1P31025 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LCN1P31025 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LCN1P31025 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LCN1P31025 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.01□□□□□ -0.01
LCN1P31025 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LCN1P31025 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 AC142381.1-201ENST00000426099 345 ntBASIC15.01□□□□□ -0.01
LCN1P31025 SPCS2P4-201ENST00000436160 681 ntBASIC15.01□□□□□ -0.01
LCN1P31025 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.01□□□□□ -0.01
LCN1P31025 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.01□□□□□ -0.01
LCN1P31025 ALG1L5P-201ENST00000482043 771 ntBASIC15.01□□□□□ -0.01
LCN1P31025 KRT8P48-201ENST00000515599 1220 ntBASIC15.01□□□□□ -0.01
LCN1P31025 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.01□□□□□ -0.01
LCN1P31025 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.01□□□□□ -0.01
LCN1P31025 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.01□□□□□ -0.01
LCN1P31025 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.01□□□□□ -0.01
LCN1P31025 AP000842.3-202ENST00000569238 1080 ntBASIC15.01□□□□□ -0.01
LCN1P31025 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.01□□□□□ -0.01
LCN1P31025 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.01□□□□□ -0.01
LCN1P31025 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.01□□□□□ -0.01
LCN1P31025 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LCN1P31025 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15□□□□□ -0.01
LCN1P31025 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15□□□□□ -0.01
LCN1P31025 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LCN1P31025 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15□□□□□ -0.01
LCN1P31025 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15□□□□□ -0.01
LCN1P31025 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 RPSAP43-201ENST00000402237 625 ntBASIC15□□□□□ -0.01
LCN1P31025 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
LCN1P31025 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15□□□□□ -0.01
LCN1P31025 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15□□□□□ -0.01
LCN1P31025 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LCN1P31025 AP000344.2-201ENST00000512987 629 ntBASIC15□□□□□ -0.01
LCN1P31025 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15□□□□□ -0.01
LCN1P31025 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15□□□□□ -0.01
LCN1P31025 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15□□□□□ -0.01
LCN1P31025 AL138918.1-201ENST00000568306 659 ntBASIC15□□□□□ -0.01
LCN1P31025 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 AC105339.1-204ENST00000636249 355 ntBASIC15□□□□□ -0.01
LCN1P31025 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
LCN1P31025 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15□□□□□ -0.01
LCN1P31025 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15□□□□□ -0.01
LCN1P31025 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15□□□□□ -0.01
LCN1P31025 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
LCN1P31025 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms