Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 METTL21AP1-201ENST00000438852 635 ntBASIC17.35■□□□□ 0.37
HLA-DRAP01903 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 KRT18P28-201ENST00000453838 1332 ntBASIC17.35■□□□□ 0.37
HLA-DRAP01903 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 BNIP3P1-202ENST00000550043 1585 ntBASIC17.35■□□□□ 0.37
HLA-DRAP01903 CYP4F24P-201ENST00000586049 1580 ntBASIC17.35■□□□□ 0.37
HLA-DRAP01903 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HLA-DRAP01903 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.35■□□□□ 0.37
HLA-DRAP01903 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 AC022188.1-201ENST00000620960 1664 ntBASIC17.34■□□□□ 0.37
HLA-DRAP01903 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DRAP01903 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DRAP01903 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DRAP01903 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DRAP01903 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRAP01903 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DRAP01903 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HLA-DRAP01903 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRAP01903 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRAP01903 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRAP01903 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DRAP01903 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 AC004987.2-201ENST00000395959 1148 ntBASIC17.33■□□□□ 0.36
HLA-DRAP01903 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.33■□□□□ 0.36
HLA-DRAP01903 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DRAP01903 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 AC025678.2-201ENST00000562061 970 ntBASIC17.33■□□□□ 0.36
HLA-DRAP01903 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 RN7SL828P-201ENST00000607615 303 ntBASIC17.33■□□□□ 0.36
HLA-DRAP01903 AL133215.2-201ENST00000609242 977 ntBASIC17.33■□□□□ 0.36
HLA-DRAP01903 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DRAP01903 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms