Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL3O95164 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 TNRC18P2-201ENST00000417666 2714 ntBASIC14.56□□□□□ -0.08
UBL3O95164 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBL3O95164 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL3O95164 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 AC006449.6-201ENST00000612330 2296 ntBASIC14.55□□□□□ -0.08
UBL3O95164 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 AL671710.1-201ENST00000610245 2349 ntBASIC14.55□□□□□ -0.08
UBL3O95164 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBL3O95164 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
UBL3O95164 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.55□□□□□ -0.08
UBL3O95164 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.55□□□□□ -0.08
UBL3O95164 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.55□□□□□ -0.08
UBL3O95164 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL3O95164 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.55□□□□□ -0.08
UBL3O95164 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL3O95164 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL3O95164 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.54□□□□□ -0.08
UBL3O95164 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.54□□□□□ -0.08
UBL3O95164 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
UBL3O95164 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.54□□□□□ -0.08
UBL3O95164 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.54□□□□□ -0.08
UBL3O95164 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 AC020765.3-201ENST00000613051 740 ntBASIC14.54□□□□□ -0.08
UBL3O95164 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
UBL3O95164 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.54□□□□□ -0.08
UBL3O95164 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBL3O95164 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.54□□□□□ -0.08
UBL3O95164 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.54□□□□□ -0.08
UBL3O95164 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms