Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.58■□□□□ 0.08
CPNE3O75131 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CPNE3O75131 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.58■□□□□ 0.08
CPNE3O75131 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CPNE3O75131 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 AC236430.1-201ENST00000402231 743 ntBASIC15.57■□□□□ 0.08
CPNE3O75131 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 AC002472.2-201ENST00000442739 958 ntBASIC15.57■□□□□ 0.08
CPNE3O75131 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.57■□□□□ 0.08
CPNE3O75131 SPDYE12P-201ENST00000618416 771 ntBASIC15.57■□□□□ 0.08
CPNE3O75131 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.57■□□□□ 0.08
CPNE3O75131 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.57■□□□□ 0.08
CPNE3O75131 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.57■□□□□ 0.08
CPNE3O75131 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CPNE3O75131 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE3O75131 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 HLA-V-204ENST00000476601 1289 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE3O75131 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE3O75131 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.56■□□□□ 0.08
CPNE3O75131 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE3O75131 AC190387.1-201ENST00000551683 408 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.56■□□□□ 0.08
CPNE3O75131 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.56■□□□□ 0.08
CPNE3O75131 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.56■□□□□ 0.08
CPNE3O75131 AC100757.3-201ENST00000622361 1406 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.56■□□□□ 0.08
CPNE3O75131 FLJ16779-201ENST00000612722 7638 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 AL645728.1-201ENST00000366221 2101 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CPNE3O75131 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
CPNE3O75131 AC063926.3-201ENST00000624734 5658 ntBASIC15.56■□□□□ 0.08
CPNE3O75131 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
CPNE3O75131 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.55■□□□□ 0.08
CPNE3O75131 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms