Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.43□□□□□ -0.1
PFDN1O60925 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.43□□□□□ -0.1
PFDN1O60925 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PFDN1O60925 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PFDN1O60925 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.43□□□□□ -0.1
PFDN1O60925 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PFDN1O60925 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
PFDN1O60925 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PFDN1O60925 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.42□□□□□ -0.1
PFDN1O60925 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.42□□□□□ -0.1
PFDN1O60925 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 AL121829.2-201ENST00000620908 328 ntBASIC14.42□□□□□ -0.1
PFDN1O60925 DNM1P41-201ENST00000623634 3350 ntBASIC14.42□□□□□ -0.1
PFDN1O60925 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.42□□□□□ -0.1
PFDN1O60925 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PFDN1O60925 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.42□□□□□ -0.1
PFDN1O60925 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PFDN1O60925 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PFDN1O60925 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.41□□□□□ -0.1
PFDN1O60925 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.41□□□□□ -0.1
PFDN1O60925 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.41□□□□□ -0.1
PFDN1O60925 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.41□□□□□ -0.1
PFDN1O60925 KRT18P61-201ENST00000585825 1298 ntBASIC14.41□□□□□ -0.1
PFDN1O60925 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 SLC22A20-204ENST00000530038 1673 ntBASIC14.41□□□□□ -0.1
PFDN1O60925 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.41□□□□□ -0.1
PFDN1O60925 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.41□□□□□ -0.1
PFDN1O60925 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
PFDN1O60925 MEX3B-202ENST00000558133 4333 ntBASIC14.41□□□□□ -0.1
PFDN1O60925 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PFDN1O60925 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms