Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 RPS8P6-201ENST00000426177 609 ntBASIC15.52■□□□□ 0.08
PRAMEF4O60810 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 RARRES2P9-201ENST00000565168 469 ntBASIC15.52■□□□□ 0.08
PRAMEF4O60810 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.52■□□□□ 0.08
PRAMEF4O60810 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRAMEF4O60810 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.52■□□□□ 0.07
PRAMEF4O60810 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
PRAMEF4O60810 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.52■□□□□ 0.07
PRAMEF4O60810 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF4O60810 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.52■□□□□ 0.07
PRAMEF4O60810 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.52■□□□□ 0.07
PRAMEF4O60810 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRAMEF4O60810 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 AC005237.2-201ENST00000434368 219 ntBASIC15.51■□□□□ 0.07
PRAMEF4O60810 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.51■□□□□ 0.07
PRAMEF4O60810 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 AC092865.5-201ENST00000545435 363 ntBASIC15.51■□□□□ 0.07
PRAMEF4O60810 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 BANF1P1-201ENST00000553684 263 ntBASIC15.51■□□□□ 0.07
PRAMEF4O60810 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PRAMEF4O60810 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRAMEF4O60810 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEF4O60810 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.5■□□□□ 0.07
PRAMEF4O60810 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms