Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.25■□□□□ 0.35
O00370 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.25■□□□□ 0.35
O00370 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.25■□□□□ 0.35
O00370 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.25■□□□□ 0.35
O00370 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.25■□□□□ 0.35
O00370 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.25■□□□□ 0.35
O00370 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.25■□□□□ 0.35
O00370 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
O00370 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
O00370 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.25■□□□□ 0.35
O00370 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
O00370 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
O00370 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
O00370 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.24■□□□□ 0.35
O00370 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
O00370 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.24■□□□□ 0.35
O00370 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.24■□□□□ 0.35
O00370 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
O00370 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
O00370 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
O00370 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
O00370 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.24■□□□□ 0.35
O00370 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 RNA5SP410-201ENST00000516285 106 ntBASIC17.24■□□□□ 0.35
O00370 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
O00370 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
O00370 GPALPP1-207ENST00000611650 899 ntBASIC17.24■□□□□ 0.35
O00370 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.24■□□□□ 0.35
O00370 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
O00370 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
O00370 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 HYMAI-201ENST00000635591 3347 ntBASIC17.23■□□□□ 0.35
O00370 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.23■□□□□ 0.35
O00370 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
O00370 AL139400.1-201ENST00000366220 510 ntBASIC17.23■□□□□ 0.35
O00370 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.23■□□□□ 0.35
O00370 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.23■□□□□ 0.35
O00370 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.23■□□□□ 0.35
O00370 AC026150.2-201ENST00000564693 1156 ntBASIC17.23■□□□□ 0.35
O00370 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.23■□□□□ 0.35
O00370 AC024267.1-201ENST00000582320 895 ntBASIC17.23■□□□□ 0.35
O00370 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.23■□□□□ 0.35
O00370 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
O00370 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.23■□□□□ 0.35
O00370 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.23■□□□□ 0.35
O00370 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
O00370 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
O00370 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
O00370 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
O00370 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
O00370 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms