Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 AC239800.4-201ENST00000603712 296 ntBASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 CETN4P-206ENST00000642099 2168 ntBASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NPIPA3F8WFD2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 HLA-V-204ENST00000476601 1289 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC105021.1-202ENST00000570572 669 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 RN7SL828P-201ENST00000607615 303 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AF228730.6-201ENST00000641497 218 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC084121.3-201ENST00000641716 218 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC105233.6-201ENST00000642093 218 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC005052.1-201ENST00000625181 2492 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 AC022144.1-201ENST00000602255 1580 ntBASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA3F8WFD2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 AC126755.1-201ENST00000525846 6405 ntBASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA3F8WFD2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms