Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 WFDC1-204ENST00000613603 549 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AL591163.1-201ENST00000641757 987 ntBASIC14.09□□□□□ -0.15
MBD3L3A6NE82 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MBD3L3A6NE82 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MBD3L3A6NE82 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
MBD3L3A6NE82 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MBD3L3A6NE82 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 GPR53P-205ENST00000457298 1084 ntBASIC14.08□□□□□ -0.16
MBD3L3A6NE82 SLED1-202ENST00000512051 380 ntBASIC14.08□□□□□ -0.16
MBD3L3A6NE82 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 HNRNPUP1-201ENST00000554987 333 ntBASIC14.08□□□□□ -0.16
MBD3L3A6NE82 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 MIR8072-201ENST00000614241 80 ntBASIC14.08□□□□□ -0.16
MBD3L3A6NE82 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
MBD3L3A6NE82 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC106886.1-201ENST00000568660 600 ntBASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 AL162274.1-201ENST00000617191 1098 ntBASIC14.07□□□□□ -0.16
MBD3L3A6NE82 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MBD3L3A6NE82 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms