Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.26□□□□□ -0.45
HLA-DRB4X5D2U9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 DBET-201ENST00000630918 3363 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 AC092474.2-201ENST00000424288 719 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 KRT18P34-201ENST00000488218 1270 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 AC112191.1-201ENST00000523689 701 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 LINC02228-204ENST00000642115 2962 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 MTHFR-217ENST00000641820 1569 ntBASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HLA-DRB4X5D2U9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 MIR940-201ENST00000401276 94 ntBASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 AC002347.1-201ENST00000569543 541 ntBASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 AL078644.1-201ENST00000609881 752 ntBASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.24□□□□□ -0.45
HLA-DRB4X5D2U9 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.23□□□□□ -0.45
HLA-DRB4X5D2U9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms