Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 AP006547.1-201ENST00000563435 692 ntBASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC23.88■■□□□ 1.41
CDC42BPBQ9Y5S2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AP003171.2-201ENST00000528208 925 ntBASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 ECM1P1-201ENST00000604092 1279 ntBASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 AC018892.3-201ENST00000623986 2499 ntBASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDC42BPBQ9Y5S2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 EEF1DP1-201ENST00000585891 896 ntBASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDC42BPBQ9Y5S2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 SCARNA20.5-201ENST00000516991 142 ntBASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23.85■■□□□ 1.41
CDC42BPBQ9Y5S2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 HIST2H2BC-201ENST00000498492 580 ntBASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC23.84■■□□□ 1.41
CDC42BPBQ9Y5S2 KRT18P25-201ENST00000508931 1278 ntBASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms