Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 TERF1P3-201ENST00000505638 1227 ntBASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SERBP1P5-201ENST00000510079 1181 ntBASIC17.02■□□□□ 0.32
CDH9Q9ULB4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 AC138761.1-201ENST00000584393 385 ntBASIC17.02■□□□□ 0.32
CDH9Q9ULB4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 AC004840.1-201ENST00000636359 365 ntBASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH9Q9ULB4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDH9Q9ULB4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 AC135586.1-201ENST00000539323 574 ntBASIC17.01■□□□□ 0.31
CDH9Q9ULB4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.01■□□□□ 0.31
CDH9Q9ULB4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 AC079328.2-201ENST00000561241 3354 ntBASIC17.01■□□□□ 0.31
CDH9Q9ULB4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH9Q9ULB4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17■□□□□ 0.31
CDH9Q9ULB4 AC134407.2-201ENST00000625089 1978 ntBASIC17■□□□□ 0.31
CDH9Q9ULB4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH9Q9ULB4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 AC006449.5-201ENST00000610658 2098 ntBASIC17■□□□□ 0.31
CDH9Q9ULB4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17■□□□□ 0.31
CDH9Q9ULB4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH9Q9ULB4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
CDH9Q9ULB4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
CDH9Q9ULB4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
CDH9Q9ULB4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH9Q9ULB4 AC114501.2-201ENST00000439631 535 ntBASIC17■□□□□ 0.31
CDH9Q9ULB4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CDH9Q9ULB4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDH9Q9ULB4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17■□□□□ 0.31
CDH9Q9ULB4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH9Q9ULB4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17■□□□□ 0.31
CDH9Q9ULB4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms