Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 FOXO1B-201ENST00000504678 1527 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC005237.2-201ENST00000434368 219 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC098859.1-201ENST00000502915 1238 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC093520.2-201ENST00000561830 333 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AP001160.2-201ENST00000596071 487 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 AC105917.1-201ENST00000506637 2539 ntBASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PPARGC1AQ9UBK2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 U82695.1-201ENST00000635752 1889 ntBASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 AL596442.2-201ENST00000610240 980 ntBASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 UXT-AS1-201ENST00000590504 1525 ntBASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PPARGC1AQ9UBK2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
PPARGC1AQ9UBK2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PPARGC1AQ9UBK2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PPARGC1AQ9UBK2 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.89■□□□□ 0.3
PPARGC1AQ9UBK2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms